Synthesis release
Statistics
Release notes
A fuller release history (including early draft versions) is available in the germinator documentation:Open Tree of Life version 8.0
Version 8.0 of the synthetic tree was generated on 29 November 2016 using the propinquity pipeline.
Downloads
There are two downloads. The first (smaller download) contain only tree and annotations files. The second (larger download) is the full output from the synthesis procedure, including documentation. You can also browse the full output.
- Tree and annotations : Several versions of the synthetic tree, along with the annotations file. See the enclosed README for details. (compressed tar archive; 29 Mbytes)
- All pipeline outputs : Outputs and documentation from all stages of the synthesis pipeline. Or, you can browse the output rather than downloading. (compressed tar archive; 151 Mbytes)
Release notes
Changes in inputs
- two new tree collections from a recent clade workshop at the Field Museum of Natural History (Cnidaria and Reef fishes)
- 99 new input trees, from the two new collections and from existing synthesis collections
Changes in output
version7.0 | version8.0 | change | |
---|---|---|---|
total tips | 2146904 | 2131472 | -15432 |
tips from phylogeny | 44608 | 53012 | 8404 |
internal nodes from taxonomy | 191841 | 191590 | -251 |
internal nodes from phylogeny | 40482 | 48448 | 7966 |
broken taxa | 2651 | 3183 | 532 |
subproblems | 5907 | 6712 | 805 |